Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869647.1_cds_XP_016433822.1_29942
CDS Infomation

[gene=LOC107760300] [db_xref=GeneID:107760300] [protein=probable ADP-ribosylation factor GTPase-activating protein AGD11] [protein_id=XP_016433822.1] [location=complement(join(53840..54121,55433..55528,55755..55871,56440..56677,56765..56928,57616..57691,58269..58353,58757..58840,59636..59681))] [gbkey=CDS]
Sequence

ATGTCTATTCCTCATGAGGGAAATGCTGATAGCAATAATGTTTCAGGTTCTTGCCTCTAT
GAACTTCTGCAAATGGAATCATCTTCAAATTGTAGTGGTCCTCAACCAGATAGACGAAAG
CGTTCTTCGAGTCCTCGACACAGACTACAGAGGCTGCTGAGTGAATCTGGCAATAGATTC
TGTGCAGATTGTGGATCTCCTGATCCAAAATGGGTATCTTTAAGTCTTGGAGTTTTTATA
TGTATCAAGTGCTCCGGAGTACATCGAAGCCTTGGAGTGCACATATCGAAGGTTCTGTCA
GTGAAGCTCGACGAATGGACAGACGACCAAGTTGATAGTTTGATAGAGATGGGTGGAAAT
AATGCAGCAAACTTGAAGTATGAAGCTTCCATTCCTGATAGTTATCGGAAGCCCAGACCA
GAGGCATCAATAGAAGAGCGTACTGACTTTATCAGGAGAAAATACGAGCTGCAGCAATTT
CTAAACTCTGATGTGCAGATGATCTGCCCCTTCCCACCATCATCATCCTCACGCTGCAAT
TCATTAAGCCTTTCTTGTAGTTTGGCCCTGGATAAGAGACATTATGAGAAGCAATCCACT
GGGCATCGCATCCATGGCATAGGGCATGCATTTCGTAATAGCTGGAGAAGGAAAGAATCT
GAACACAGGAGCACCAAGAAAAGTAACTCAATGGCAGGTATGGTTGAATTTATAGGATTG
ATAAAAGTCAATGTGGTGAGAGGGACCAACCTAGCTGTCCGTGATGTGGTAACAAGTGAT
CCTTATGTAATTCTCTCCTTGGGAAGCCAGTCAGTCAAGACGCGTGTCATCAAGAACAAT
CTTAACCCTGTCTGGAATGAAAAGCTAATGTTGTCAATTCCAGAAAATGTTCCTTCTTTG
AAAGTGCTTGTCTATGACAAGGATACATTCACAACTGACGACTTCATGGGGGAAGCTGAG
ATTGACATTCAGCCTCTTGTTACTGCTGCAAAAGCATCTGAAAACTCGACACTCGGTGAA
TCAATGCCGCTTGGGAAATTGAAAGCAAGCAAAGAAAACACTCTTGTTAAAGATGGCATT
ATCAGTCTAATAGATGGTAAGGTGAAACAGGATATCACTGTGAAGCTGCAGAATGTTGAA
AGGGGAGTACTAGAGATTGAGCTTGAATGTGTTCCTCTCACACAATAA

Peptide Sequence

PEP ID

XP_016433822.1
PEP Infomation

PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Nicotiana tabacum]
Sequence

MSIPHEGNADSNNVSGSCLYELLQMESSSNCSGPQPDRRKRSSSPRHRLQRLLSESGNRF
CADCGSPDPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLDEWTDDQVDSLIEMGGN
NAANLKYEASIPDSYRKPRPEASIEERTDFIRRKYELQQFLNSDVQMICPFPPSSSSRCN
SLSLSCSLALDKRHYEKQSTGHRIHGIGHAFRNSWRRKESEHRSTKKSNSMAGMVEFIGL
IKVNVVRGTNLAVRDVVTSDPYVILSLGSQSVKTRVIKNNLNPVWNEKLMLSIPENVPSL
KVLVYDKDTFTTDDFMGEAEIDIQPLVTAAKASENSTLGESMPLGKLKASKENTLVKDGI
ISLIDGKVKQDITVKLQNVERGVLEIELECVPLTQ

Transcript Sequence

Gene sequence data has not been registered.